Package | Description |
---|---|
uk.ac.ebi.pride.utilities.data.controller.impl.ControllerImpl | |
uk.ac.ebi.pride.utilities.data.controller.impl.Transformer |
Modifier and Type | Method and Description |
---|---|
List<CVLookup> |
PrideXmlControllerImpl.getCvLookups()
Get a list of cv lookup objects.
|
List<CVLookup> |
MzMLControllerImpl.getCvLookups()
Get a list of cvlookups, these are not cached
|
List<CVLookup> |
MzIdentMLControllerImpl.getCvLookups()
Get a list of cv lookup objects.
|
List<CVLookup> |
MzDataControllerImpl.getCvLookups()
Get a list of cvlookups, these are not cached
|
Modifier and Type | Method and Description |
---|---|
static CVLookup |
MzMLTransformer.transformCVLookup(uk.ac.ebi.jmzml.model.mzml.CV oldCv)
Convert cv lookups
|
static CVLookup |
MzDataTransformer.transformCVLookup(uk.ac.ebi.pride.tools.mzdata_parser.mzdata.model.CvLookup oldCvLookup)
Convert cv lookups
|
static CVLookup |
MzIdentMLTransformer.transformToCVLookup(uk.ac.ebi.jmzidml.model.mzidml.Cv oldCv) |
Modifier and Type | Method and Description |
---|---|
static List<CVLookup> |
MzMLTransformer.transformCVList(uk.ac.ebi.jmzml.model.mzml.CVList oldCvList)
Convert cv loopups
|
static List<CVLookup> |
MzIdentMLTransformer.transformCVList(List<uk.ac.ebi.jmzidml.model.mzidml.Cv> cvList) |
static List<CVLookup> |
MzDataTransformer.transformCVList(List<uk.ac.ebi.pride.tools.mzdata_parser.mzdata.model.CvLookup> oldCvList)
Convert cv loopups
|
static List<CVLookup> |
PrideXmlTransformer.transformCvLookups(List<uk.ac.ebi.pride.jaxb.model.CvLookup> rawCvLookups)
Transform a list of cvlookup object from pride Xml format to core data model format.
|
Modifier and Type | Method and Description |
---|---|
static void |
MzIdentMLTransformer.setCvLookupMap(Map<String,CVLookup> cvLookupList) |
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