Modifier and Type | Method and Description |
---|---|
List<DataProcessing> |
PrideXmlControllerImpl.getDataProcessings()
Get a list of data processing objects
|
List<DataProcessing> |
MzXmlControllerImpl.getDataProcessings()
Get a list of data processings by checking the cache first
|
List<DataProcessing> |
MzMLControllerImpl.getDataProcessings()
Get a list of data processings by checking the cache first
|
List<DataProcessing> |
MzDataControllerImpl.getDataProcessings()
Get a list of data processings by checking the cache first
|
Modifier and Type | Method and Description |
---|---|
static DataProcessing |
PrideXmlTransformer.transformDataProcessing(uk.ac.ebi.pride.jaxb.model.DataProcessing rawDataProcessing)
Transform data processing from pride xml to core data model format.
|
static DataProcessing |
MzMLTransformer.transformDataProcessing(uk.ac.ebi.jmzml.model.mzml.DataProcessing oldDataProcessing)
Convert data processing
|
static DataProcessing |
MzXmlTransformer.transformDataProcessing(int order,
uk.ac.ebi.pride.tools.mzxml_parser.mzxml.model.DataProcessing oldDataProcessing)
Convert data processing
|
Modifier and Type | Method and Description |
---|---|
static List<DataProcessing> |
MzDataTransformer.transformDataProcessing(uk.ac.ebi.pride.tools.mzdata_parser.mzdata.model.DataProcessing oldDataProcessing)
Convert data processing
|
static List<DataProcessing> |
MzMLTransformer.transformDataProcessingList(uk.ac.ebi.jmzml.model.mzml.DataProcessingList oldDataProcessingList)
Convert a list of data prcessings
|
static List<DataProcessing> |
MzXmlTransformer.transformDataProcessingList(List<uk.ac.ebi.pride.tools.mzxml_parser.mzxml.model.DataProcessing> rawDataProcList)
Convert a list of data prcessings
|
Modifier and Type | Method and Description |
---|---|
DataProcessing |
MzGraph.getDataProcessing() |
DataProcessing |
BinaryDataArray.getDataProcessing() |
Modifier and Type | Method and Description |
---|---|
List<DataProcessing> |
MzGraphMetaData.getDataProcessings() |
Modifier and Type | Method and Description |
---|---|
void |
MzGraph.setDataProcessing(DataProcessing dataProcessing) |
void |
BinaryDataArray.setDataProcessing(DataProcessing dataProcessing) |
Modifier and Type | Method and Description |
---|---|
void |
MzGraphMetaData.setDataProcessings(List<DataProcessing> dataProcessings) |
Constructor and Description |
---|
BinaryDataArray(DataProcessing dataProcessing,
double[] binaryDoubleArr,
ParamGroup params)
Constructor
|
Chromatogram(Comparable id,
String name,
int index,
DataProcessing defaultDataProcessing,
int defaultArrayLength,
List<BinaryDataArray> binaryDataArrays) |
Chromatogram(ParamGroup params,
Comparable id,
String name,
int index,
DataProcessing defaultDataProcessing,
int defaultArrayLength,
List<BinaryDataArray> binaryDataArrays) |
MzGraph(Comparable id,
String name,
int index,
DataProcessing defaultDataProcessing,
int defaultArrayLength,
List<BinaryDataArray> binaryDataArrays) |
MzGraph(ParamGroup params,
Comparable id,
String name,
int index,
DataProcessing defaultDataProcessing,
int defaultArrayLength,
List<BinaryDataArray> binaryDataArrays) |
Spectrum(Comparable id,
String name,
int index,
DataProcessing defaultDataProcessing,
int defaultArrayLength,
List<BinaryDataArray> binaryDataArrays,
String spotID,
SourceFile sourceFile,
ScanList scanList,
List<Precursor> precursors,
List<ParamGroup> products,
List<Peptide> peptide) |
Spectrum(ParamGroup params,
Comparable id,
String name,
int index,
DataProcessing defaultDataProcessing,
int defaultArrayLength,
List<BinaryDataArray> binaryDataArrays,
String spotID,
SourceFile sourceFile,
ScanList scanList,
List<Precursor> precursors,
List<ParamGroup> products) |
Spectrum(ParamGroup params,
Comparable id,
String name,
int index,
DataProcessing defaultDataProcessing,
int defaultArrayLength,
List<BinaryDataArray> binaryDataArrays,
String spotID,
SourceFile sourceFile,
ScanList scanList,
List<Precursor> precursors,
List<ParamGroup> products,
List<Peptide> peptide) |
Constructor and Description |
---|
MzGraphMetaData(Comparable id,
String name,
List<ScanSetting> scanSettings,
List<InstrumentConfiguration> instrumentConfigurations,
List<DataProcessing> dataProcessings) |
MzGraphMetaData(ParamGroup params,
Comparable id,
String name,
List<ScanSetting> scanSettings,
List<InstrumentConfiguration> instrumentConfigurations,
List<DataProcessing> dataProcessings) |
Copyright © 2015 European Bioinformatics Institute. All Rights Reserved.