Package | Description |
---|---|
uk.ac.ebi.pride.utilities.data.controller.impl.ControllerImpl | |
uk.ac.ebi.pride.utilities.data.controller.impl.Transformer | |
uk.ac.ebi.pride.utilities.data.core |
Modifier and Type | Method and Description |
---|---|
List<Person> |
PrideXmlControllerImpl.getPersonContacts() |
List<Person> |
MzXmlControllerImpl.getPersonContacts()
Get a list of person contacts
|
List<Person> |
MzTabControllerImpl.getPersonContacts()
Return a List of Persons
|
List<Person> |
MzMLControllerImpl.getPersonContacts()
Get a list of person contacts
|
List<Person> |
MzIdentMLControllerImpl.getPersonContacts()
Get a list of Person Contacts
|
List<Person> |
MzDataControllerImpl.getPersonContacts()
Get a list of person contacts
|
Modifier and Type | Method and Description |
---|---|
static Person |
MzTabTransformer.transformContactToPerson(uk.ac.ebi.pride.jmztab.model.Contact contact) |
static Person |
MzIdentMLTransformer.transformToPerson(uk.ac.ebi.jmzidml.model.mzidml.Person oldPerson) |
Modifier and Type | Method and Description |
---|---|
static List<Person> |
PrideXmlTransformer.transformContactToPerson(uk.ac.ebi.pride.jaxb.model.Admin rawAdmin)
Transform a list of contacts from person contact
|
static Collection<Person> |
MzTabTransformer.transformContactToPersons(Map<Integer,uk.ac.ebi.pride.jmztab.model.Contact> contacts) |
static List<Person> |
MzMLTransformer.transformFileDescriptionToPerson(uk.ac.ebi.jmzml.model.mzml.FileDescription rawFileDescription)
Method to retrieve the Contact Persons From the FileDescription Object in the MzMl Files
|
static List<Person> |
MzXmlTransformer.transformPersonContacts(List<uk.ac.ebi.pride.tools.mzxml_parser.mzxml.model.Operator> operators) |
static List<Person> |
MzIdentMLTransformer.transformToPerson(List<uk.ac.ebi.jmzidml.model.mzidml.Person> oldPersons) |
static List<Person> |
MzDataTransformer.transformToPerson(List<uk.ac.ebi.pride.tools.mzdata_parser.mzdata.model.Person> oldPersons)
Method to retrieve the Contact Persons From the FileDescription Object in the mzData Files
|
Modifier and Type | Method and Description |
---|---|
List<Person> |
ExperimentMetaData.getPersons() |
Modifier and Type | Method and Description |
---|---|
void |
ExperimentMetaData.setPersons(List<Person> persons) |
Constructor and Description |
---|
ExperimentMetaData(ParamGroup params,
Comparable id,
String name,
String version,
String shortLabel,
List<Sample> samples,
List<Software> softwares,
List<Person> persons,
List<SourceFile> sourceFiles,
Provider provider,
List<Organization> organizations,
List<Reference> references,
Date creationDate,
Date publicDate,
ExperimentProtocol protocol) |
ExperimentMetaData(ParamGroup params,
Comparable id,
String name,
String version,
String shortLabel,
List<Sample> samples,
List<Software> softwares,
List<Person> persons,
List<SourceFile> sourceFiles,
Provider provider,
List<Organization> organizations,
List<Reference> references,
Date creationDate,
Date publicDate,
ExperimentProtocol protocol,
List<SpectraData> spectraDatas) |
ExperimentMetaData(ParamGroup params,
Comparable id,
String name,
String version,
String shortLabel,
List<Sample> samples,
List<Software> softwares,
List<Person> persons,
List<SourceFile> sourceFiles,
Provider provider,
List<Organization> organizations,
List<Reference> references,
Date creationDate,
Date publicDate,
ExperimentProtocol protocol,
List<SpectraData> spectraDatas,
Map<Comparable,StudyVariable> studyVariables)
This controller is specially designed for mzTab files that contains Study Variables with description, etc.
|
Copyright © 2015 European Bioinformatics Institute. All Rights Reserved.