uk.ac.ebi.pride.utilities.iongen.impl

Class DefaultPeptideIon

java.lang.Object

uk.ac.ebi.pride.utilities.iongen.impl.DefaultPeptideIon

All Implemented Interfaces:

PeptideIon

Direct Known Subclasses:

AbstractPrecursorIon, AbstractProductIon

public class DefaultPeptideIon
extends Object
implements PeptideIon

Version:

0.1-SNAPSHOT

Author:

Qingwei XU

Constructor Summary

Constructors

Constructor and Description
DefaultPeptideIon(Peptide peptide, int charge) Create a peptide ion.

Method Summary

Methods

Modifier and Type	Method and Description
boolean	equals(Object o)
int	getCharge()
double	getMass()
double	getMassOverCharge()
Peptide	getPeptide()
int	hashCode()
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

DefaultPeptideIon

public DefaultPeptideIon(Peptide peptide,
                 int charge)

Create a peptide ion.

Parameters:

peptide - can not set null, otherwise throw NullPointerException.

charge -

Method Detail

getMassOverCharge

public double getMassOverCharge()

Specified by:

getMassOverCharge in interface PeptideIon

Returns:

the m/z value of ion.

getCharge

public int getCharge()

Specified by:

getCharge in interface PeptideIon

Returns:

charge count of ion. The charge can be positron or negative electron. 0 means no charge on ion.

getMass

public double getMass()

Specified by:

getMass in interface PeptideIon

Returns:

the mass value of ion.

getPeptide

public Peptide getPeptide()

Specified by:

getPeptide in interface PeptideIon

Returns:

the Peptide of ion.

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object