uk.ac.ebi.pride.utilities.iongen.ion

Class FragmentIonType

java.lang.Object

uk.ac.ebi.pride.utilities.iongen.ion.FragmentIonType

All Implemented Interfaces:

Cloneable

public class FragmentIonType
extends Object
implements Cloneable

FragmentIonType defines different type of fragment ion annotations. Refer to FragmentIonTypeColor for specific color.

Field Summary

Fields

Modifier and Type	Field and Description
static FragmentIonType	A_ION
static FragmentIonType	AMBIGUOUS_ION
static FragmentIonType	B_ION
static FragmentIonType	C_ION
static FragmentIonType	CO_ELUTING_ION
static FragmentIonType	D_ION d ions from partial side chain fragmentation of a ions
static FragmentIonType	IMMONIUM_ION
static FragmentIonType	IN_SOURCE_ION
static FragmentIonType	NON_IDENTIFIED_ION
static FragmentIonType	PRECURSOR_ION
static FragmentIonType	V_ION v ions from complete side chain fragmentation of y ions
static FragmentIonType	W_ION w ions from partial side chain fragmentation of z ions
static FragmentIonType	X_ION
static FragmentIonType	Y_ION
static FragmentIonType	Z_ION

Method Summary

Methods

Modifier and Type	Method and Description
Object	clone()
boolean	equals(Object o)
String	getLabel()
String	getName()
int	hashCode()
String	toString()

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

A_ION

public static final FragmentIonType A_ION

B_ION

public static final FragmentIonType B_ION

C_ION

public static final FragmentIonType C_ION

D_ION

public static final FragmentIonType D_ION

d ions from partial side chain fragmentation of a ions

X_ION

public static final FragmentIonType X_ION

Y_ION

public static final FragmentIonType Y_ION

Z_ION

public static final FragmentIonType Z_ION

V_ION

public static final FragmentIonType V_ION

v ions from complete side chain fragmentation of y ions

W_ION

public static final FragmentIonType W_ION

w ions from partial side chain fragmentation of z ions

AMBIGUOUS_ION

public static final FragmentIonType AMBIGUOUS_ION

IMMONIUM_ION

public static final FragmentIonType IMMONIUM_ION

IN_SOURCE_ION

public static final FragmentIonType IN_SOURCE_ION

CO_ELUTING_ION

public static final FragmentIonType CO_ELUTING_ION

NON_IDENTIFIED_ION

public static final FragmentIonType NON_IDENTIFIED_ION

PRECURSOR_ION

public static final FragmentIonType PRECURSOR_ION

Method Detail

getName

public String getName()

getLabel

public String getLabel()

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

clone

public Object clone()
             throws CloneNotSupportedException

Overrides:

clone in class Object

Throws:

CloneNotSupportedException

toString

public String toString()

Overrides:

toString in class Object