uk.ac.ebi.pride.utilities.mol

Class IsoelectricPointUtils

java.lang.Object

uk.ac.ebi.pride.utilities.mol.IsoelectricPointUtils

public class IsoelectricPointUtils
extends Object

IsoelectricPointUtils is used to calculate the theoretical isoelectric point of a peptide

At the moment we only support one method, and the peptide PTMs are not taken into account

Author:

ypriverol, rwang Date: 03/08/2011 Time: 13:55

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	IsoelectricPointUtils.BjellpI

Constructor Summary

Constructors

Constructor and Description
IsoelectricPointUtils()

Method Summary

Methods

Modifier and Type	Method and Description
static double	calculate(String peptideSeq)
static String	replaceSpecialAA(String seq)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

IsoelectricPointUtils

public IsoelectricPointUtils()

Method Detail

calculate

public static double calculate(String peptideSeq)

replaceSpecialAA

public static String replaceSpecialAA(String seq)