Package | Description |
---|---|
uk.ac.ebi.pride.utilities.mol |
Modifier and Type | Field and Description |
---|---|
static Group |
Group.CO
CO group used in calcute the mass of a and x ion.
|
static Group |
Group.H |
static Group |
Group.H2O
Water group.
|
static Group |
Group.NH
NH group used in calcute the mass of z ion.
|
static Group |
Group.NH3
Ammonia group
|
static Group |
Group.OH |
Modifier and Type | Method and Description |
---|---|
Group |
Peptide.getCTerminalGroup() |
Group |
Peptide.getNTerminalGroup() |
Constructor and Description |
---|
Peptide(List<AminoAcid> acidList,
Group n_terminal,
Group c_terminal)
Create a peptide without PTM.
|
Peptide(List<AminoAcid> acidList,
Group n_terminal,
Group c_terminal,
Map<Integer,PTModification> ptm)
Create a peptide with PTM.
|
Peptide(String sequence,
Group n_terminal,
Group c_terminal)
Create a peptide without PTM.
|
Peptide(String sequence,
Group n_terminal,
Group c_terminal,
Map<Integer,PTModification> ptm)
Create a peptide with PTM.
|
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