Interface | Description |
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Mass |
Mass provides a set of interfaces to get monoisotopic mass and average mass.
|
Class | Description |
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AminoAcidSequence |
Peptide represents a list of
|
GraviUtilities | |
Group |
Chemical Group, which including at least one Element.
|
IsoelectricPointUtils |
IsoelectricPointUtils is used to calculate the theoretical isoelectric point of a peptide
At the moment we only support one method, and the peptide PTMs are not taken into account
|
IsoelectricPointUtils.BjellpI | |
MoleculeUtilities |
Utility class for Molecule operations
|
NeutralLoss |
neutral losses
|
Peptide |
A peptide including three parts: N terminal group, C terminal group and a couple of AminoAcids.
|
PTModification |
PTModification stores modification details, this class is not enum because
there are many different types of modifications.
|
Enum | Description |
---|---|
AminoAcid |
Enumeration of 20 amino acids.
|
Atom |
Atom is an enum which stores all chemical elements.
|
Element |
Chemical element, this is a enum class.
|
NuclearParticle |
NuclearParticle is an enum which stores all the nuclear particles.
|
ProductIonPair |
This is enum class.
|
ProductIonType |
Creator: Qingwei-XU
Date: 23/10/12
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Copyright © 2015 European Bioinformatics Institute. All Rights Reserved.